BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C04SP1|AL425497
(1011 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1894 0.0
>3x_Contig1517
Length = 8289
Score = 1894 bits (954), Expect = 0.0
Identities = 980/987 (99%), Gaps = 2/987 (0%)
Strand = Plus / Minus
Query: 1 agtttcatcattactaatctcacggtcaaaaccattatttttaacggcaaacaaaccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3725 agtttcatcattactaatctcacggtcaaaaccattatttttaacggcaaacaaaccctt 3666
Query: 61 gaccagatgtgattgtgatatatgcggcggtagggaaatcaaatccttcacgtatatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3665 gaccagatgtgattgtgatatatgcggcggtagggaaatcaaatccttcacgtatatatt 3606
Query: 121 taggtcatcttttctcttttttgaaatggtatctgtcacatacggaactggacccggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3605 taggtcatcttttctcttttttgaaatggtatctgtcacatacggaactggacccggtat 3546
Query: 181 atatggcattatacgtttcgtccactgaccattagtgtctcttagtttacccccttctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3545 atatggcattatacgtttcgtccactgaccattagtgtctcttagtttacccccttctgc 3486
Query: 241 agggaagatatcgagtagctttacttgtaaatcatagaaatcttcataataacgcttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3485 agggaagatatcgagtagctttacttgtaaatcatagaaatcttcataataacgcttcaa 3426
Query: 301 aatacgcgtggtgttgttggataactgacacgagacttggaaccaatacttatcgtcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3425 aatacgcgtggtgttgttggataactgacacgagacttggaaccaatacttatcgtcctg 3366
Query: 361 taggaaaaatgtctcgactgcngcgtaggtaaggaaaacggcatcagcaggataggttgt 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3365 taggaaaaatgtctcgactgcagcgtaggtaaggaaaacggcatcagcaggataggttgt 3306
Query: 421 attggcagcgctcgagtgctgcgtgctggggtgtggttgacggttttgtgaattttgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3305 attggcagcgctcgagtgctgcgtgctggggtgtggttgacggttttgtgaattttgcct 3246
Query: 481 ggattgtgatcggtgttgcacgtacgactgaccctgctgttccactgaacctagtgtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3245 ggattgtgatcggtgttgcacgtacgactgaccctgctgttccactgaacctagtgtgat 3186
Query: 541 attgctagccttgtaacgggcgatattgatcttccattcttggaccgagggtagattcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3185 attgctagccttgtaacgggcgatattgatcttccattcttggaccgagggtagattcac 3126
Query: 601 tgattcgatatcgctttttacatcatttcccgtggcataaccagtagctatatctatwat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3125 tgattcgatatcgctttttacatcatttcccgtggcataaccagtagctatatctataat 3066
Query: 661 agtcacaaaaccaacaggaactagaccgggaccacccaacctgccaatgggcttagcgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 agtcacaaaaccaacaggaactagaccgggaccacccaacctgccaatgggcttagcgat 3006
Query: 721 aaaccattcaaaatcgtgatgagcacaaatgaacaagttttctccggcataggctgttaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 aaaccattcaaaatcgtgatgagcacaaatgaacaagttttctccggcataggctgttaa 2946
Query: 781 ctcatctgcctgtttctgcttgaaaatcatacagtacaattgcataaagagttcccatat 840
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2945 ctcatctgcct-tttctgcttgaaaatcatacagtacaattgcataaagagttcccatat 2887
Query: 841 tggaaggttgttgttgctgctgttgctgctgttgctgctgatgatgctgttataactgat 900
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2886 tggaaggttgttgttgctgctgttgctgctgttgctgctgatgatgctgtaataactgat 2827
Query: 901 tactaccgacagatccatttctatttatacttttcaccggtgatgcatgcgaattttggc 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 2826 tactaccgacagatccatttctatttatacttttcaccggtgatgcatgcgaatttggcc 2767
Query: 961 ttgttctg-caaaaatctcgaaataat 986
|||||||| ||||||||||||||||||
Sbjct: 2766 ttgttctgccaaaaatctcgaaataat 2740
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7087
Number of Sequences: 1807
Number of extensions: 7087
Number of successful extensions: 309
Number of sequences better than 1.0e-20: 1
length of query: 1011
length of database: 10,358,551
effective HSP length: 16
effective length of query: 995
effective length of database: 10,329,639
effective search space: 10277990805
effective search space used: 10277990805
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)